BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008D04SP1|AL425848
(776 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1302 1538 0.0
>3x_Contig1302
Length = 5215
Score = 1538 bits (776), Expect = 0.0
Identities = 776/776 (100%)
Strand = Plus / Minus
Query: 1 gatccaaaacgctaccattgcgagaactgtagcgaaggatgtaccgtatttactgggttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4045 gatccaaaacgctaccattgcgagaactgtagcgaaggatgtaccgtatttactgggttg 3986
Query: 61 gatgaataaaaggggagattgaaagcatctagcacattagattccacttttttttttcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3985 gatgaataaaaggggagattgaaagcatctagcacattagattccacttttttttttcaa 3926
Query: 121 gctatacaacttttgatgaaaagcggggtatggcgatttcataattttatccgagaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3925 gctatacaacttttgatgaaaagcggggtatggcgatttcataattttatccgagaaaat 3866
Query: 181 tcggagagcggggcgcggaactgtgcgcggtggttggatactgtttcccgaaagaatggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3865 tcggagagcggggcgcggaactgtgcgcggtggttggatactgtttcccgaaagaatggg 3806
Query: 241 aaaggataatatttgtgtacatgtattggcaccactcattactgctctctttgtgtccgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3805 aaaggataatatttgtgtacatgtattggcaccactcattactgctctctttgtgtccgg 3746
Query: 301 atcatacgtgtggggcttgctacccctcacgtcactctagacgaataatttcccggtttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3745 atcatacgtgtggggcttgctacccctcacgtcactctagacgaataatttcccggtttt 3686
Query: 361 tttatttatttttttttcgtttccctctctttctcttattatgccatattacactatacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3685 tttatttatttttttttcgtttccctctctttctcttattatgccatattacactatacc 3626
Query: 421 acttccactcagtatggtacgtttcaagaaaaaataaagggggtgggtgcccaggaaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3625 acttccactcagtatggtacgtttcaagaaaaaataaagggggtgggtgcccaggaaaat 3566
Query: 481 tccgagccatctctaacagctctcccccgcccccgcttcaccaacctaaatttgaaaaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3565 tccgagccatctctaacagctctcccccgcccccgcttcaccaacctaaatttgaaaaat 3506
Query: 541 cactgagagcagaaagaacaaaatctccccaaagtctacccgatgtaaaatcggagtttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3505 cactgagagcagaaagaacaaaatctccccaaagtctacccgatgtaaaatcggagtttc 3446
Query: 601 tacatcaaacccgtagtgatgcacaactcggcaaccgtcaatgcccgattcctggactaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3445 tacatcaaacccgtagtgatgcacaactcggcaaccgtcaatgcccgattcctggactaa 3386
Query: 661 tcatcggaacgagcaccatctcatttcaaccatccaactaaaatgcatcgtgtggagggg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3385 tcatcggaacgagcaccatctcatttcaaccatccaactaaaatgcatcgtgtggagggg 3326
Query: 721 tccgattgccaaatttttccagttattcttgaaattgggtaacgactaagaccaat 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3325 tccgattgccaaatttttccagttattcttgaaattgggtaacgactaagaccaat 3270
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7476
Number of Sequences: 1807
Number of extensions: 7476
Number of successful extensions: 126
Number of sequences better than 1.0e-20: 1
length of query: 776
length of database: 10,358,551
effective HSP length: 16
effective length of query: 760
effective length of database: 10,329,639
effective search space: 7850525640
effective search space used: 7850525640
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)